Genetic tool development in marine protists: emerging model organisms for experimental cell biology

Nature Methods2020Drahomíra Faktorová, R. Ellen R. Nisbet, José Fernández Robledo, Elena Casacuberta, Lisa Sudek, Andrew E. Allen, Manuel Ares, Cristina Aresté, Cecilia Balestreri, Adrian C. Barbrook, Patrick Beardslee, Sara Bender, David S. Booth, François-Yves Bouget, Chris C. Bowler, Susana Breglia, Colin Brownlee, Gertraud Burger, Heriberto Cerutti, Rachele Cesaroni, Miguel A. Chiurillo, Thomas Clemente, Duncan B. Coles, Jackie L. Collier, Elizabeth Cooney, Kathryn Coyne, Roberto Docampo, Christopher L. Dupont, Virginia Edgcomb, Elin Einarsson, Pía Elustondo, Fernan Federici, Veronica Freire-Beneitez, Nastasia J. Freyria, Kodai Fukuda, Paulo Garcia, Peter R. Girguis, Fatma Gomaa, Sebastian Gornik, Jian Guo, Vladimir Hampl, Yutaka Hanawa, Esteban Haro-Contreras, Elisabeth Hehenberger, Andrea Highfield, Yoshihisa Hirakawa, Amanda Hopes, Christopher J. Howland, Ian Hu, Jorge Ibañez, Nicholas Irwin, Yuu Ishii, Natalia Ewa Janowicz, Adam C. Jones, Ambar Kachale, Konomi Fujimura-Kamada, Binnypreet Kaur, Jonathan Z. Kaye, Eleanna Kazana, Patrick J Keeling, Nicole King, Lawrence Klobutcher, Noelia Lander, Imen Lassadi, Zhuhong Li, Senjie Lin, Jean Claude Lozano, Fulei Luan, Shinichiro Maruyama, Tamara Matute, Cristina Miceli, Jun Minagawa, Mark Moosburner, Sebastián R. Najle, Deepak Nanjappa, Isabel C. Nimmo, Luke Noble, Anna M. G. Novák Vanclová, Mariusz Nowacki, Isaac Nuñez, Arnab Pain, Angela Piersanti, Sandra Pucciarelli, Jan Pyrih, Joshua Rest, Mariana Rius, Deborah Robertson, Albane Ruaud, Inaki Ruiz-Trillo, Monika Sigg, Pamela Silver, Claudio H. Slamovits, G. Jason Smith, Brittany Sprecher, Rowena Stern, Estienne C. Swart, Anastasios D Tsaousis, Lev Tsypin , Aaron Turkewitz, Jernej Turnšek, Matus Valach, Valérie Vergé, Peter von Dassow, Tobias von Der Haar, Ross Frederick Waller, Wang Lu, Xiaoxue Wen, Glen Wheeler, April Woods, Huan Zhang, Thomas Mock, Alexandra Z Worden, Julius Lukes

Nature Methods, 2020, ⟨10.1038/s41592-020-0796-x⟩

Diverse microbial ecosystems underpin life in the sea. Among these microbes are many unicellular eukaryotes that span the diversity of the eukaryotic tree of life. However, genetic tractability has been limited to a few species, which do not represent eukaryotic diversity or environmentally relevant taxa. Here, we report on the development of genetic tools in a range of protists primarily from marine environments. We present evidence for foreign DNA delivery and expression in 13 species never before transformed and for advancement of tools for eight other species, as well as potential reasons for why transformation of yet another 17 species tested was not achieved. Our resource in genetic manipulation will provide insights into the ancestral eukaryotic lifeforms, general eukaryote cell biology, protein diversification and the evolution of cellular pathways.

Drahomíra Faktorová, R. Ellen R. Nisbet, José Fernández Robledo, Elena Casacuberta, Lisa Sudek, et al.. Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods, 2020, ⟨10.1038/s41592-020-0796-x⟩ - lien externe. ⟨hal-03018835⟩ - lien externe

Citations

APA

Faktorová, D., Nisbet, R. E. R., Fernández Robledo, J., Casacuberta, E., Sudek, L., Allen, A. E., Ares, M., Aresté, C., Balestreri, C., Barbrook, A. C., Beardslee, P., Bender, S., Booth, D. S., Bouget, F.-Y., Bowler, C., Breglia, S., Brownlee, C., Burger, G., Cerutti, H., … Lukes, J. (2020). Genetic tool development in marine protists: emerging model organisms for experimental cell biology. In Nature Methods. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7200600

MLA

Faktorová, Drahomíra, et al. “Genetic Tool Development in Marine Protists: Emerging Model Organisms for Experimental Cell Biology.” Nature Methods, May 2020, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7200600.

Chicago

Faktorová, Drahomíra, R. Ellen R. Nisbet, José Fernández Robledo, Elena Casacuberta, Lisa Sudek, Andrew E. Allen, Manuel Ares, et al. 2020. “Genetic Tool Development in Marine Protists: Emerging Model Organisms for Experimental Cell Biology.” Nature Methods. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7200600.

Harvard

Faktorová, D. et al. (2020) “Genetic tool development in marine protists: emerging model organisms for experimental cell biology,” Nature Methods. Available at: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7200600.

ISO 690

FAKTOROVÁ, Drahomíra, NISBET, R. Ellen R., FERNÁNDEZ ROBLEDO, José, CASACUBERTA, Elena, SUDEK, Lisa, ALLEN, Andrew E., ARES, Manuel, ARESTÉ, Cristina, BALESTRERI, Cecilia, BARBROOK, Adrian C., BEARDSLEE, Patrick, BENDER, Sara, BOOTH, David S., BOUGET, François-Yves, BOWLER, Chris, BREGLIA, Susana, BROWNLEE, Colin, BURGER, Gertraud, CERUTTI, Heriberto, CESARONI, Rachele, CHIURILLO, Miguel A., CLEMENTE, Thomas, COLES, Duncan B., COLLIER, Jackie L., COONEY, Elizabeth, COYNE, Kathryn, DOCAMPO, Roberto, DUPONT, Christopher L., EDGCOMB, Virginia, EINARSSON, Elin, ELUSTONDO, Pía, FEDERICI, Fernan, FREIRE-BENEITEZ, Veronica, FREYRIA, Nastasia J., FUKUDA, Kodai, GARCIA, Paulo, GIRGUIS, Peter R., GOMAA, Fatma, GORNIK, Sebastian, GUO, Jian, HAMPL, Vladimir, HANAWA, Yutaka, HARO-CONTRERAS, Esteban, HEHENBERGER, Elisabeth, HIGHFIELD, Andrea, HIRAKAWA, Yoshihisa, HOPES, Amanda, HOWLAND, Christopher J., HU, Ian, IBAÑEZ, Jorge, IRWIN, Nicholas, ISHII, Yuu, JANOWICZ, Natalia Ewa, JONES, Adam C., KACHALE, Ambar, FUJIMURA-KAMADA, Konomi, KAUR, Binnypreet, KAYE, Jonathan Z., KAZANA, Eleanna, KEELING, Patrick J, KING, Nicole, KLOBUTCHER, Lawrence, LANDER, Noelia, LASSADI, Imen, LI, Zhuhong, LIN, Senjie, LOZANO, Jean Claude, LUAN, Fulei, MARUYAMA, Shinichiro, MATUTE, Tamara, MICELI, Cristina, MINAGAWA, Jun, MOOSBURNER, Mark, NAJLE, Sebastián R., NANJAPPA, Deepak, NIMMO, Isabel C., NOBLE, Luke, NOVÁK VANCLOVÁ, Anna M. G., NOWACKI, Mariusz, NUÑEZ, Isaac, PAIN, Arnab, PIERSANTI, Angela, PUCCIARELLI, Sandra, PYRIH, Jan, REST, Joshua, RIUS, Mariana, ROBERTSON, Deborah, RUAUD, Albane, RUIZ-TRILLO, Inaki, SIGG, Monika, SILVER, Pamela, SLAMOVITS, Claudio H., JASON SMITH, G., SPRECHER, Brittany, STERN, Rowena, SWART, Estienne C., TSAOUSIS, Anastasios D, TSYPIN , Lev, TURKEWITZ, Aaron, TURNŠEK, Jernej, VALACH, Matus, VERGÉ, Valérie, VON DASSOW, Peter, VON DER HAAR, Tobias, WALLER, Ross Frederick, LU, Wang, WEN, Xiaoxue, WHEELER, Glen, WOODS, April, ZHANG, Huan, MOCK, Thomas, WORDEN, Alexandra Z and LUKES, Julius, 2020. Genetic tool development in marine protists: emerging model organisms for experimental cell biology [en ligne]. May 2020. Disponible à l'adresse : https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7200600